Reference

External Functions

Build a complete site or one of its components.

fastprocessphegwas()

Prepare the dataframe to pass to landscape function

landscapefast()

Interactive 3-D association landscape for many phenotypes

iphegwas()

Prepare the dataframe to pass to landscape function

ldscmod()

Function to use LDSC

Available Datasets

ibd

IBD GWAS summary dataset

UlcerativeColitis

UlcerativeColitis GWAS summary dataset

Wasisthipratio

Wasisthipratio GWAS summary dataset

CrohnsDisease

CrohnsDisease GWAS summary dataset

bmi

bmi GWAS summary dataset

hdl

HDL GWAS summary dataset (made available from Lipid consortium data files)

ldl

LDL GWAS summary dataset (made available from Lipid consortium data files)

tchol

TOTAL CHOLESTROL GWAS summary dataset (made available from Lipid consortium data files)

trig

TRIG GWAS summary dataset (made available from Lipid consortium data files)